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  • RoMI95
    Junior Member
    • Feb 2017
    • 2

    #1

    Searching for databases and repositories for AML rna seq data

    I am looking Rna seq data of AML patients. i have tried GDC portal and i only found data on only around 300 patients can someone suggest other databases or repositories that would give data on AML patients like the GDC portal?
  • Markiyan
    Senior Member
    • Sep 2010
    • 126

    #2
    Find the detailed description of their RNAseq experimental & data analysis protocol.

    Search for some recent papers on amyloid leukemia, where they had submitted the RNAseq data to the SRA and have a look at NCBI's SRA and EBI's ENA.
    Last edited by Markiyan; 04-06-2017, 02:26 AM. Reason: Posted in the wrong thread.

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    • CraigRepositive
      Junior Member
      • Nov 2016
      • 4

      #3
      I had a quick look on repositive (I was logged in) and found 1802 datasets matching to the term "RNA Seq AML" - you can see the results here: https://discover.repositive.io/datas...NA%20Seq%20AML

      You don't need an account to this this list.

      Most seem to be from SRA with 39 from Array Express

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