Hi all:
I'm doing some data crunching on our lab's RNA-seq data and have encountered a difficult task. One thing I would like to do is to plot the averaged read coverage for a group of genes. It sounds similar to a promoter plot but is complicated by the nature of discontinuous exons and various transcript lengths. Not sure how this can be done. Can anyone refer to a software tool or method? Does anyone understand what I'm talking?
I'm doing some data crunching on our lab's RNA-seq data and have encountered a difficult task. One thing I would like to do is to plot the averaged read coverage for a group of genes. It sounds similar to a promoter plot but is complicated by the nature of discontinuous exons and various transcript lengths. Not sure how this can be done. Can anyone refer to a software tool or method? Does anyone understand what I'm talking?
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