Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • IMG File Naming - Clarification Provided

    I am posting this as a resource for others. My question was answered by a staff member at IMG.

    My question was as follows: I am trying to collect QC'd sequencing files from a pre-existing project. When I use Globus Connect to navigate through the project IDs associated with the project I find series of 3 project IDs (consecutive) contain mostly identical files, but are in folders with other files that have been treated differently. These projectIDs have identical nameing except for the added descriptor of either "FD" or "AP" (or no additional descriptor).

    It would be helpful to understand what these descriptors mean in order to select the correct data. Please advise on which project ID 'types' (ie. FD, AP, or unmarked) I should download.

  • #2
    Response:

    There are different projectIDs for 'umbrella project' (FD), which contains all the children 'sequencing projects' (SP) and 'analysis projects' (AP) done under it.

    So, one can find copies of files from the FD in SP and AP folders (i.e. under different ProjectIDs).

    Comment

    Latest Articles

    Collapse

    • seqadmin
      Investigating the Gut Microbiome Through Diet and Spatial Biology
      by seqadmin




      The human gut contains trillions of microorganisms that impact digestion, immune functions, and overall health1. Despite major breakthroughs, we’re only beginning to understand the full extent of the microbiome’s influence on health and disease. Advances in next-generation sequencing and spatial biology have opened new windows into this complex environment, yet many questions remain. This article highlights two recent studies exploring how diet influences microbial...
      02-24-2025, 06:31 AM
    • seqadmin
      Quality Control Essentials for Next-Generation Sequencing Workflows
      by seqadmin




      Like all molecular biology applications, next-generation sequencing (NGS) workflows require diligent quality control (QC) measures to ensure accurate and reproducible results. Proper QC begins at nucleic acid extraction and continues all the way through to data analysis. This article outlines the key QC steps in an NGS workflow, along with the commonly used tools and techniques.

      Nucleic Acid Quality Control
      Preparing for NGS starts with isolating the...
      02-10-2025, 01:58 PM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by seqadmin, 03-03-2025, 01:15 PM
    0 responses
    28 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 02-28-2025, 12:58 PM
    0 responses
    124 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 02-24-2025, 02:48 PM
    0 responses
    485 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 02-21-2025, 02:46 PM
    0 responses
    241 views
    0 likes
    Last Post seqadmin  
    Working...
    X