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  • capricy
    Senior Member
    • Apr 2012
    • 125

    #1

    looking for a tools to predict peptide sequence from nucleotide sequence

    Hello,

    I have some assembled sequence with low coverage. Since the assembly quality is suboptimal, I am looking for a tool to predict the peptide sequence instead of directly translating.

    I used to use Prot4EST, but somehow the link is not working anymore. Wonder if anyone would suggest alternative tools?

    Thanks a lot!

    C.
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    EMBOSS tools. You can use the command line versions or the web interface here.

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