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  • ac91
    Member
    • Aug 2015
    • 13
    #1

    Biomart - export the highest transcript

    Hi,

    Does anyone know if it is possible to export a specific transcript from biomart? I just want to export the highest one.

    Thanks!
    Tags: None
    • GenoMax
      Senior Member
      • Feb 2008
      • 7142
      #2
      You may need to get the transcripts (include the "transcript length" in your header options) and then parse for the longest version.

      Take a look at this thread (http://seqanswers.com/forums/showthread.php?t=63408) and the site (http://appris.bioinfo.cnio.es/#/) mentioned there in.

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