Hi,
I have sequenced samples from cat and identified miRNA in those samples using miRDeep2. I used humans as reference and mouse/dog as related reference in miRDeep2.
How do one go about predicting targets for these identified miRNAs? TargetScan etc usually have a limited list to use in target predictions and, well, cats aren't in it... What is the custom way to go when you do miRNA-research in a specie not so well researched?
Appreciate input and guidance forward with my sequences.
I have sequenced samples from cat and identified miRNA in those samples using miRDeep2. I used humans as reference and mouse/dog as related reference in miRDeep2.
How do one go about predicting targets for these identified miRNAs? TargetScan etc usually have a limited list to use in target predictions and, well, cats aren't in it... What is the custom way to go when you do miRNA-research in a specie not so well researched?
Appreciate input and guidance forward with my sequences.