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Gviz Installation

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  • Gviz Installation

    Hello I am using R 3.2.3 on ubuntu 16.04 LTS and I can't the R package Gviz

    I have done the following:

    source("https://bioconductor.org/biocLite.R")

    biocLite("Gviz")

    I think the problem is with biovizBase and when I try to install that I get the following warnings and error messages

    biocLite("biovizBase")

    Warning: multiple methods tables found for ‘unlist’

    Warning: replacing previous import by ‘S4Vectors::unlist’ when loading ‘biovizBase’
    Warning: replacing previous import by ‘S4Vectors::unlist’ when loading ‘IRanges’
    Error : Functions found when exporting methods from the namespace ‘IRanges’ which are not S4 generic: ‘which.max’, ‘which.min’
    ERROR: lazy loading failed for package ‘biovizBase’
    * removing ‘/usr/local/lib/R/site-library/biovizBase’

    The downloaded source packages are in
    ‘/tmp/RtmpVEQwqp/downloaded_packages’
    Warning message:
    In install.packages(pkgs = doing, lib = lib, ...) :
    installation of package ‘biovizBase’ had non-zero exit status

    What should I do to install Gviz and biovizBase?

    Thanks Peder
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