Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • sehrrot
    Member
    • Jul 2010
    • 58

    #1

    CASAVA installation

    Dear all,

    I have a problem about CASAVA installation.
    As per Linux manual, I typed 'sudo apt-get install CASAVA_v1.7.0.rpm' in the terminal. (I am using Ubuntu). Till "reading state information" was done well. But it said "E:unable to locate package CASAVA_v1.7.0-Linux-x86_64.rpm" and failed to install.

    I could simply use browser for unpacking rpm file but I didn't know how I move on the next step. Illumina Casava guide looks so difficult to understand. I found the instruction for installation but I coudn't understand.

    Is there anyone who help me to install Casava on Linux? I am newbie in bioinformatics so it's hard to understand Linux system.....
  • drio
    Senior Member
    • Oct 2008
    • 323

    #2
    rpm is not the default package manager in ubuntu (debian). You'll have to get the .deb version from illumina to make it work in your distribution.

    If they don't have it, you can always get the tarball. The precompiled version will be easier though.
    -drd

    Comment

    Latest Articles

    Collapse

    • kinpict.com
      Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
      by kinpict.com
      The part about this topic feels surprisingly grounded, and the details on the page is the bit that made me slow down. I’d keep <a href="https://kinpict.com/">ai family photo generator</a> bookmarked for later.
      Today, 06:37 PM
    • SEQadmin2
      16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
      by SEQadmin2





      NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
      10-30-2026, 06:46 AM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by SEQadmin2, 11-12-2026, 07:59 AM
    0 responses
    27 views
    0 reactions
    Last Post SEQadmin2  
    Started by SEQadmin2, 11-05-2026, 09:25 AM
    0 responses
    35 views
    0 reactions
    Last Post SEQadmin2  
    Started by SEQadmin2, 11-03-2026, 11:54 AM
    2 responses
    56 views
    0 reactions
    Last Post kinpict.com  
    Started by SEQadmin2, 10-28-2026, 09:57 AM
    0 responses
    175 views
    0 reactions
    Last Post SEQadmin2  
    Working...