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RefSeq accession number to Greengenes id

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  • RefSeq accession number to Greengenes id

    Hi,
    I would like to systematically convert many refseq accession numbers to the id used in Greengenes and rdp detabases. The refseq numbers I have are for different bacteria genomes.
    I also have the taxid, so if converting it is easier it can also work.

    For example: [refseq ac. id: NC_013209.1 ; taxid: 634452]
    >to>
    greengenes/rdp id: S004064631.

    How can I do it systematically preferably using matlab?

    Thank you,
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