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  • Yexzm
    Junior Member
    • Dec 2017
    • 5

    Problem with downloading ANNOVAR databases

    Hi ! I'm trying to download ANNOVAR db using :

    ./annotate_variation.pl -buildver hg19 -downdb exac03 humandb

    and I get :

    Code:
    WARNING: cannot retrieve remote files automatically (by 'wget' command or by standard Net::FTP/LWP::UserAgent Perl module).
    Please manually download the following file, uncompress the files to humandb directory, then add a hg19_ prefix to the file names.
    http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/exac03.txt.gz
    However, wget, Net::FTP and LWP::UserAgent seem to be installed :

    Code:
    which wget
    /usr/bin/wget
    And I get documentation when I write "perldoc Net::FTP" or "LWP::UserAgent". Could anyone help me ?

    Thanks !!!

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