Hi everybody,
I'd like to map 454 (+illumina) reads to a genomic contig to get the splice variants possibilities.
It would be great if it could be linked to a visual interface resembling that: http://www.timelogic.com/decypher_genedetective.html
(first image)
I*tried ssahaEST and smalt but could not find a good way to visualize the outcome (such as in genedetective above).
Any advice welcomed!
Best,
Yvan
I'd like to map 454 (+illumina) reads to a genomic contig to get the splice variants possibilities.
It would be great if it could be linked to a visual interface resembling that: http://www.timelogic.com/decypher_genedetective.html
(first image)
I*tried ssahaEST and smalt but could not find a good way to visualize the outcome (such as in genedetective above).
Any advice welcomed!
Best,
Yvan