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  • yao_licr
    Junior Member
    • Jul 2014
    • 7
    #1

    How to assign genomic coordinates to cytoband

    Hi All,
    I am trying to convert the genomic coordinates into cytoband (hg19) into 1p36.21 format.

    Chromosome chromStart chromEnd
    11 869858 869958
    1 26143624 26143724
    11 71529199 71529299
    3 8932073 8932173
    12 10760453 10760553
    12 11126254 11126354
    3 15115361 15115461
    1 16559045 16559145
    1 16802320 16802420

    Is there any way to convert all the coordinates in the same time using Perl script or in R?

    Thanks a lot!
    Yao
    Tags: None
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