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  • ketan_bnf
    Member
    • Oct 2010
    • 59

    Can't configure MAQ.

    Hi all,

    When i try to configure MAQ, it could not find ANSI C header files, why?

    orf@ubuntu:~/maq-0.7.1$ ./configure
    checking for a BSD-compatible install... /usr/bin/install -c
    checking whether build environment is sane... yes
    checking for a thread-safe mkdir -p... /bin/mkdir -p
    checking for gawk... no
    checking for mawk... mawk
    checking whether make sets $(MAKE)... yes
    checking build system type... i686-pc-linux-gnu
    checking host system type... i686-pc-linux-gnu
    checking for gcc... gcc
    checking for C compiler default output file name... a.out
    checking whether the C compiler works... yes
    checking whether we are cross compiling... no
    checking for suffix of executables...
    checking for suffix of object files... o
    checking whether we are using the GNU C compiler... yes
    checking whether gcc accepts -g... yes
    checking for gcc option to accept ISO C89... none needed
    checking for g++... no
    checking for c++... no
    checking for gpp... no
    checking for aCC... no
    checking for CC... no
    checking for cxx... no
    checking for cc++... no
    checking for cl.exe... no
    checking for FCC... no
    checking for KCC... no
    checking for RCC... no
    checking for xlC_r... no
    checking for xlC... no

    checking whether we are using the GNU C++ compiler... no
    checking whether g++ accepts -g... no
    checking if gcc accepts -m64... yes
    checking how to run the C preprocessor... gcc -E
    checking for grep that handles long lines and -e... /bin/grep
    checking for egrep... /bin/grep -E
    checking for ANSI C header files... no
    checking for sys/types.h... no
    checking for sys/stat.h... no
    checking for stdlib.h... no
    checking for string.h... no
    checking for memory.h... no
    checking for strings.h... no
    checking for inttypes.h... no
    checking for stdint.h... no
    checking for unistd.h... no
    checking zlib.h usability... no
    checking zlib.h presence... no
    checking for zlib.h... no

    configure: creating ./config.status
    config.status: creating Makefile
    config.status: creating config.h
    config.status: config.h is unchanged
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    It looks like you are missing a lot of development build stuff, like the GCC C++ compiler. Have you done "sudo apt-get install build-essentials"?

    Comment

    • ketan_bnf
      Member
      • Oct 2010
      • 59

      #3
      Thanks for your reply.

      I have not tried "sudo apt-get install build-essentials".

      But after posting this question i tried, and luckily i succeed, i just go into maq directory and apllied

      > sudo apt-get install maq (for ubuntu 9.10)

      and it did the work.

      Thanks.

      Comment

      • maubp
        Peter (Biopython etc)
        • Jul 2009
        • 1544

        #4
        Using "sudo apt-get install maq" is much easier, but check to see if the version you get from the Ubuntu/Debian repository is up to date. To get the very latest version you may need to compile it from source (or fetch from another repository, e.g. Debian testing).

        Comment

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