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  • mapper
    Member
    • Nov 2010
    • 17

    #1

    bowtie mapping stats

    How to print bowtie stats in a file??

    I want to print this output( bowtie mapping stats) in a file...

    Time loading forward index: 00:00:00
    Time loading mirror index: 00:00:00
    Seeded quality full-index search: 00:00:00
    # reads processed: 1000
    # reads with at least one reported alignment: 699 (69.90%)
    # reads that failed to align: 301 (30.10%)
    Reported 699 alignments to 1 output stream(s)
    Time searching: 00:00:00
    Overall time: 00:00:00
  • feng
    Member
    • Oct 2010
    • 50

    #2
    bowtie .... >> file.log 2>&1

    Comment

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