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  • litc
    Member
    • Oct 2010
    • 24

    #1

    How can I look up CDS from NCBI

    I want to look up CDS of some species in NCBI, where can I get them?
  • ntremblay
    Member
    • Dec 2009
    • 31

    #2
    I'm not familiar with NCBI,

    but you can download pairwise or miltiple alignement from UCSC (ie. http://hgdownload.cse.ucsc.edu/downloads.html#human for human vs other species.)

    or

    you can visualise those tracks in a genome browser like UCSC genome browser or Vista Browser wich is especially good for inter-specie comparisons,

    hope that help,
    Nicolas Tremblay
    Graduate Student

    Cardiovascular Genetics - Andelfinger Lab
    CHU Ste-Justine Research Center

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