Does Mira create scaffolds during paired-end read sequence assemblies? gsAssembler does, so I just assumed Mira would. But maybe I need to run downstream software (Bambus?) to extract this information?
--
Phillip
--
Phillip
You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register now, and join the discussion
library all 1000 6000 (.......).* pair (.*)_left (.*)_right
perl -i -pe 's/ */\t/g' 454Contigs.mates
# Priorities priority ALL 1 # Redundancies redundancy 2 # min group size mingroupsize 0
goBambus -c 454Contigs.contig -m 454Contigs.mates -o 454Contigs_bambus -C 454Contigs_bambus.conf
Topics | Statistics | Last Post | ||
---|---|---|---|---|
Started by seqadmin, 04-11-2024, 12:08 PM
|
0 responses
31 views
0 likes
|
Last Post
by seqadmin
04-11-2024, 12:08 PM
|
||
Started by seqadmin, 04-10-2024, 10:19 PM
|
0 responses
33 views
0 likes
|
Last Post
by seqadmin
04-10-2024, 10:19 PM
|
||
Started by seqadmin, 04-10-2024, 09:21 AM
|
0 responses
28 views
0 likes
|
Last Post
by seqadmin
04-10-2024, 09:21 AM
|
||
Started by seqadmin, 04-04-2024, 09:00 AM
|
0 responses
53 views
0 likes
|
Last Post
by seqadmin
04-04-2024, 09:00 AM
|
Comment