After I run cuffcompare, there is a prefix.loci file which is not explained in the user manual. I guess it is the combined gene file for different samples. However, after I run cuffdiff, the items in cuffdiff output genes.fpkm_tracking are much less than the items in prefix.loci. Why so many "gene" outputed by cuffcompare discarded by cuffdiff?
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The immune system’s power comes from its genetic diversity, allowing myriad threats to be neutralized through first recognizing foreign antigens. That diversity is also what makes the immune system so difficult to study. Recent advances in sequencing technology and computational biology, however, are giving researchers new tools to understand immune responses and immune-related diseases in greater detail.
This convergence of genetics, immunology, and computation...09-01-2026, 05:41 AM