MACS peaks.bed

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khb

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Join Date: Dec 2010

Posts: 15
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#1

MACS peaks.bed

01-10-2011, 06:13 AM

Hi
I wounder how MACS score the peaks. When you run MACS you get a output peaks.bed, this file include chromosome, start, stop, peaknumber and a score. How does MACS create this score? Does the length of the peak affect the score value?
Thanks
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rebrendi

ng

Join Date: May 2008

Posts: 78
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#2

03-25-2012, 04:03 AM

is it really the score in the last column of the "NAME_peaks.bed" file?
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