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  • #1

    MACS peaks.bed

    Hi
    I wounder how MACS score the peaks. When you run MACS you get a output peaks.bed, this file include chromosome, start, stop, peaknumber and a score. How does MACS create this score? Does the length of the peak affect the score value?
    Thanks
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  • #2
    is it really the score in the last column of the "NAME_peaks.bed" file?

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