Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • pallascat
    Junior Member
    • Jun 2019
    • 2

    #1

    Tool to find publications related to a specific gene

    Hello, I am looking for a tool where I can submit a list of gene names and get back relevant publications for each gene. I remember hearing about such programs in passing, but can't seem to find one. I have tried using NCBI Batch Entrez with little luck. Thanks!!
  • middlemale
    Member
    • Feb 2010
    • 16

    #2
    may DAVID (https://david.ncifcrf.gov/) 'gene report' do the job?

    Comment

    • GenoMax
      Senior Member
      • Feb 2008
      • 7142

      #3
      You can use Entrezdirect utilities to query Pubmed database.

      Code:
      $ esearch -db pubmed -query "BRCA2 [GENE]" | esummary -format docsum | xtract -pattern DocumentSummary -element Title,FullJournalName,ELocationID
      
      Understanding Factors Associated with Uptake of BRCA1/2 Genetic Testing among Orthodox Jewish Women in the USA Using a Mixed-Methods Approach.  Public health genomics  doi: 10.1159/000499852
      Novel Germline Mutations of BRCA1 and BRCA2 in Korean Familial Breast Cancer Patients.  Chonnam medical journal doi: 10.4068/cmj.2019.55.2.99
      Clinical characteristics and outcomes in elderly women with BRCA1 and BRCA2 mutations.  Gynecologic oncology    pii: S0090-8258(19)31261-2. doi: 10.1016/j.ygyno.2019.05.017

      Comment

      • pallascat
        Junior Member
        • Jun 2019
        • 2

        #4
        these work great, thanks!!!

        Comment

        Latest Articles

        Collapse

        • SEQadmin2
          16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
          by SEQadmin2




          NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification, detection...
          Today, 06:46 AM
        • SEQadmin2
          Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
          by SEQadmin2



          Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

          Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
          ...
          10-14-2026, 09:55 AM

        ad_right_rmr

        Collapse

        News

        Collapse

        Topics Statistics Last Post
        Started by SEQadmin2, 10-28-2026, 09:57 AM
        0 responses
        22 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-28-2026, 09:51 AM
        0 responses
        14 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-22-2026, 11:13 AM
        0 responses
        67 views
        0 reactions
        Last Post SEQadmin2  
        Started by SEQadmin2, 10-22-2026, 10:48 AM
        0 responses
        47 views
        0 reactions
        Last Post SEQadmin2  
        Working...