Hi everyone,
I am new to this forum and bioinformatic methods. I have whole genome resequencing data for 180 haploid individual from same mother and have VCF file after variant calling. I am planning to perform a linkage mapping using RQTL/ASMap. Is there any tool to extract SNP information as an input for RQTL from VCF file?
Thanks a lot for any help.
- P
I am new to this forum and bioinformatic methods. I have whole genome resequencing data for 180 haploid individual from same mother and have VCF file after variant calling. I am planning to perform a linkage mapping using RQTL/ASMap. Is there any tool to extract SNP information as an input for RQTL from VCF file?
Thanks a lot for any help.
- P