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  • shayoni_seq
    Junior Member
    • Feb 2011
    • 1
    #1

    problems with MAQ

    the problem is that i ve 56 lakh query tags and when i use the maq.pl easyrun -d command for aligning my query tags with the reference seq only 14 lakh get loaded and about 4 lakh align. all of them are single end reads of not more than 100bp( actually <25bp). what could be the reason that all of them dont load???
    please rply.....
    Tags: None
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