No problem, good luck with your further analysis.
-
-
bowtie-build error
Hi boetsie,Originally posted by boetsie View Post
SSPACE must be very useful tool for scaffolding. But when I tried to use it, the process was failed by bowtie-build step. I only have contig file contains all name with super_contig sequences without other information and there are lots of 'N' gaps between. Do I need to modify some information and get bowtie-build works? If not, what's the problem?
The reads I have are 100PE
so the library is like
lib1 ***1.fastq ***2.fastq 200 0.7 0
or I should replace 200 to 400?Comment
-
The immune system’s power comes from its genetic diversity, allowing myriad threats to be neutralized through first recognizing foreign antigens. That diversity is also what makes the immune system so difficult to study. Recent advances in sequencing technology and computational biology, however, are giving researchers new tools to understand immune responses and immune-related diseases in greater detail.
This convergence of genetics, immunology, and computation...09-01-2026, 05:41 AM
Comment