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  • HSJD19
    Junior Member
    • Dec 2010
    • 3
    #1

    SAM to Blast format

    Does anyone have a script (or know if one is available ) to convert SAM files to the MegaBlast output format?
    I want to use miRDeep but would like to use Bowtie for the mapping.

    Thanks
    Tags: None
    • naluru
      Member
      • Jul 2010
      • 16
      #2
      SAM to blast format

      I am also looking for an answer to the above question. If anyone has any ideas, could you please share it.

      Thank you.

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