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  • Erika Feltrin
    Junior Member
    • Apr 2010
    • 7

    #1

    Bioscope small indel frag tool

    hello all,

    .pas file generate by the smallindelfrag option of Bioscope has 4 tab separated columns.
    The first one is the genome position given by the formula: C*232 + P -1 (c=chromosome number; P= position on that chromosome)

    so the question is:
    if I have only one chromosome then C=1 but is it possible that I obtained all genome positions (the first .pas column) that start with 429XXXXXXX.

    Thanks
    Erika

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