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  • targetbcell
    Junior Member
    • May 2011
    • 2

    #1

    Annotation alignment software????

    I want to compare eight nucleotide sequences (each sequence: 40000 bp) for annotation similarity (protein similarity). I need to introduce a Bioinformatics tool or software, that able to alignment the annotations.
    Best wishes,
  • Thorondor
    Member
    • Feb 2011
    • 69

    #2
    The MPI Bioinformatics Toolkit is an interactive web service which offers access to a great variety of public and in-house bioinformatics tools. They are grouped into different sections that support sequence searches, multiple alignment, secondary and tertiary structure prediction and classification.


    take a look, have fun. ;-)

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    • targetbcell
      Junior Member
      • May 2011
      • 2

      #3
      Dear my friend,
      I want a graphical interface annotation alignment tool that showed the annotated alignment in graphical view
      like this

      http://www.sciencedirect.com/science...1163e73bf70864


      I tested all of toolkit "http://toolkit.tuebingen.mpg.de/sections/alignment" previously.
      Last edited by targetbcell; 05-04-2011, 03:23 AM.

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