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  • evoll
    Junior Member
    • May 2011
    • 1
    #1

    Illumina SNP format to merlin format

    Hi Friends,

    I have a data i following format an looking for a script to convert it in to merlin format. Please help

    SNP Chromosome Position ind1 ind2 ind3 ind4 ind5 ind6 ind7
    rs10458597 1 564621 CC CC CC CC CC CC CC
    rs12565286 1 721290 GG GG GG GG GG GG GG
    rs12082473 1 740857 GG GG GG GG GG GG GG
    rs3094315 1 752566 AA AA GA AA AA GA AA
    rs2286139 1 761732 TT TT CT TT TT CT TT
    rs11240776 1 765269 AA AA AA AA AA AA AA
    rs2980319 1 777122 TT TT AT TT TT AT TT
    rs2980300 1 785989 CC CC TC CC CC TC CC
    rs2905036 1 792480 TT TT TT TT TT TT TT
    rs11240777 1 798959 GG GG AG GG GG AG GG
    rs4245756 1 799463 CC CC CC CC CC CC CC
    rs3748597 1 888659 CT CC CC CC CT CC CT
    rs2341354 1 918573 AG GG AG GG AG AG AG
    rs4970403 1 926431 TT TT TT TT TT TT TT
    rs2465126 1 947034 AA AA AA AA AA AA AA

    thanks and best regards,

    Evoll
    Tags: None
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