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  • agseq
    Junior Member
    • Mar 2009
    • 3

    #1

    Companies offering NGS data analysis including RNAseq

    Our institution is increasing use of Illumina platform NGS, but at this time many investigators don't have a great deal of experience in use of the platform and analysis of the data. Our interests lie in everything from project design to RNAseq data analysis. Several institutions/commercial vendors provide both sequencing and data analysis, however, because we will have access to an instrument, we are looking more toward the design and data analysis side. Any suggestions or resources to look at would be appreciated.

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    Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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  • SEQadmin2
    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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    NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
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