As far as chrY
We provide all our variation data in VCF format which serves our needs quite well, if you have a better idea for your own needs then you should be able to get all the info you need from these files to do the conversion
Look at http://www.1000genomes.org/faq/how-d...your-vcf-files for streaming if you want to avoid downloading the entire data set
We provide all our variation data in VCF format which serves our needs quite well, if you have a better idea for your own needs then you should be able to get all the info you need from these files to do the conversion
Look at http://www.1000genomes.org/faq/how-d...your-vcf-files for streaming if you want to avoid downloading the entire data set
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