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johnsequence

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Join Date: Jan 2010

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GEO sequence count

05-12-2011, 07:15 AM

Hello, anyone

It is an easy question, but I do not know. How can I use the GEO sequence count file that can be downloaded from GEO raw file? The file format contains two columns, first is sequence, second is count, like ATGCTCCCTTAA 2340. Do I need realign them back to genome or directly use them? Thanks.
John
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