bgzf_check_EOF

[junfeng]

Hi, Guys,

Can anybody tell me the answers to the following questions

1. Recently I am trying to merge two .bam files with Samtools merge. I got this message:

[bam_header_read] bgzf_check_EOF: Invalid argument

However, the programs continue to proceed as if nothing has happened?

2. Another question about the merge: it is an inner join or outer join?

Thanks