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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Annovar annotation with 1000g by Jamica
Started by Jamica, 01-13-2013, 03:17 PM
2 responses
6,217 views
0 reactions
 Last Post HESmith
by HESmith
09-16-2016, 04:04 AM  
Tophat error: could not get read# 3868130 from stream! by foxriverlin
Started by foxriverlin, 06-29-2012, 08:27 AM
11 responses
5,285 views
0 reactions
 Last Post razanipgr
by razanipgr
09-16-2016, 02:31 AM  
meme motifs by mparida
Started by mparida, 09-15-2016, 07:59 AM
0 responses
1,433 views
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 Last Post mparida
by mparida
09-15-2016, 07:59 AM  
Uneak pipeline in gbsv2 by meghavarshney
Started by meghavarshney, 09-14-2016, 09:37 PM
0 responses
2,253 views
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 Last Post meghavarshney
by meghavarshney
09-14-2016, 09:37 PM  
50bp SE vs 125bp PE RADseq study design by michfish86
Started by michfish86, 09-14-2016, 09:15 AM
4 responses
1,920 views
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 Last Post atcghelix
by atcghelix
09-14-2016, 02:26 PM  
Cuffmerge Errors: cannot execute gtf_to_sam and other errors by mhatha
Started by mhatha, 09-11-2016, 05:21 PM
1 response
2,262 views
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 Last Post mhatha
by mhatha
09-14-2016, 10:59 AM  
Bowtie2 - how many output sam files? by sells78
Started by sells78, 09-13-2016, 08:38 AM
1 response
1,676 views
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 Last Post dpryan
by dpryan
09-13-2016, 11:16 PM  
Quantification of shared alleles between two genomes by balaena
Started by balaena, 09-13-2016, 04:48 AM
0 responses
1,407 views
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 Last Post balaena
by balaena
09-13-2016, 04:48 AM  
Question: Reference assisted genome assembly - TOOLS by Patrice
Started by Patrice, 09-08-2016, 06:09 AM
1 response
2,515 views
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 Last Post balaena
by balaena
09-13-2016, 02:33 AM  
Increasing the length of the kmers od Spades beyond 127 by Edoardo
Started by Edoardo, 03-17-2016, 06:20 AM
7 responses
3,162 views
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 Last Post El Crazy Xabi
by El Crazy Xabi
09-12-2016, 07:19 PM  
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