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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Problem retrieving snps and indels from FVB mouse by Avro1986
Started by Avro1986, 03-04-2014, 11:40 AM
0 responses
1,532 views
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 Last Post Avro1986
by Avro1986
03-04-2014, 11:40 AM  
Sambamba, ldmd2, BioD - on RHEL 6 by rsc
Started by rsc, 03-03-2014, 11:34 AM
1 response
2,141 views
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 Last Post rsc
by rsc
03-04-2014, 09:55 AM  
Help regg. tools for comparing two sets of contigs from de-novo assembly by jsreddy82
Started by jsreddy82, 02-11-2013, 03:41 PM
1 response
2,332 views
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 Last Post Joel_91
by Joel_91
03-04-2014, 07:13 AM  
DESeq2 colData pData by coutellec
Started by coutellec, 02-20-2014, 12:26 PM
4 responses
2,075 views
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 Last Post albireo
by albireo
03-04-2014, 05:20 AM  
Differentially expressed genes by Parharn
Started by Parharn, 02-24-2014, 08:44 AM
11 responses
3,308 views
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 Last Post Parharn
by Parharn
03-04-2014, 03:16 AM  
Performing ANOVA test for NGS time sereis datasets by unique379
Started by unique379, 03-04-2014, 01:52 AM
1 response
2,316 views
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 Last Post dpryan
by dpryan
03-04-2014, 02:09 AM  
freebayes with ogap by DNAjunk
Started by DNAjunk, 03-03-2014, 12:40 AM
2 responses
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 Last Post DNAjunk
by DNAjunk
03-03-2014, 11:36 PM  
BWA for Illumina 1.8+ encoding by oursu
Started by oursu, 03-03-2014, 06:25 PM
1 response
1,727 views
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 Last Post GenoMax
by GenoMax
03-03-2014, 07:09 PM  
CLC workbench sucks ... by yaximik
Started by yaximik, 09-21-2013, 08:09 AM
26 responses
19,089 views
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 Last Post kmcarr
by kmcarr
03-03-2014, 04:18 PM  
Mapping quality value by neha
Started by neha, 06-05-2013, 02:47 AM
4 responses
17,191 views
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 Last Post Brian Bushnell
by Brian Bushnell
03-03-2014, 04:12 PM  
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