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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc
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Started by laura, 05-09-2011, 04:42 AM
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35 responses
107,315 views
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by laura
12-05-2013, 02:37 AM
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Started by sci_guy, 01-23-2008, 11:19 PM
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236 responses
682,819 views
1 reaction
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by ECO
12-25-2009, 06:45 PM
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Started by sjuzhet, 03-28-2019, 06:47 AM
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1 response
1,120 views
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by GenoMax
03-28-2019, 06:59 AM
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Started by boetsie, 07-09-2012, 02:31 AM
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52 responses
25,977 views
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by jgroh
03-27-2019, 10:41 PM
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Started by titti, 03-25-2019, 06:39 AM
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2 responses
1,368 views
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by titti
03-26-2019, 08:07 AM
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Started by chrisi.hahni, 03-25-2019, 05:46 AM
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1 response
1,780 views
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by chrisi.hahni
03-26-2019, 02:35 AM
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Started by RTM, 03-26-2019, 02:01 AM
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0 responses
2,443 views
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by RTM
03-26-2019, 02:01 AM
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Started by dazhudou1122, 01-09-2019, 07:39 AM
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1 response
7,353 views
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Started by deKoch13, 03-14-2019, 05:35 AM
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1 response
2,636 views
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Started by kuldeep, 03-20-2019, 03:48 PM
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2 responses
1,708 views
0 reactions
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by GenoMax
03-25-2019, 08:18 AM
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Started by dineshkumarsrk, 03-25-2019, 06:46 AM
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0 responses
935 views
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Started by pitch_, 03-18-2019, 09:59 AM
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6 responses
1,655 views
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by pitch_
03-24-2019, 11:50 PM
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by SEQadmin2
Childhood cancers, effectively fatal 60 years ago, are now curable for up to 85% of children with access to contemporary treatments and...-
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05-08-2026, 01:42 AM -
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by GATTACATLove this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.
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Channel: Articles
07-01-2026, 11:43 AM -
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by SEQadmin2
I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.
Here are nine questions we think about, in roughly the order they matter, before...-
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by SEQadmin2
Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.
The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
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Channel: Articles
06-02-2026, 10:05 AM -
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Started by SEQadmin2, 07-02-2026, 11:08 AM
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0 responses
12 views
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by SEQadmin2
07-02-2026, 11:08 AM
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Started by SEQadmin2, 06-30-2026, 05:37 AM
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0 responses
14 views
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by SEQadmin2
06-30-2026, 05:37 AM
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Started by SEQadmin2, 06-26-2026, 11:10 AM
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0 responses
20 views
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by SEQadmin2
06-26-2026, 11:10 AM
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