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  • ysx0226
    Junior Member
    • Sep 2013
    • 1
    #1

    how to do selective sweep analysis

    Hi all，
    I am doing selective sweep now using my snp datas.My snps are called by GATK tools.Is there some programm,i can use to do the analysis.
    I had use the "plink" and PGDspiders,but there are some mistakes about format convert?
    Thank you !
    Tags: selective sweep
    • tracecakes
      Member
      • Jun 2013
      • 16
      #2
      Hi there, maybe you can try SweepFinder or SweeD (based on SweepFinder), Nielson et al 2005. I am about to try it out myself

      tracecakes

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        • Laruo
          Member
          • Feb 2012
          • 13
          #3
          hi!

          PoPoolation and OmegaPlus are also designed for this purpose

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