Novoalign query

[arkal]

Hey i have a licensed version of Novoalign... i wanted to know the maximum number of threads that Novo can handle per run(with 1 thread per core).... I run a rocks SGE with a suffficient number of cores.

The manual shows -c 99.. is that the default and can i increase it?

Thanks in advance
-A

[arkal]

32 views and no replies... help please?

-A

[sparks]

Hi,

Novoalign knows no limit, the 99 is just to illustrate a numeric field. We have had users report linear performance improvements up to 128 cores but performance does depend on quite a lot of factors.

Colin