Does anybody know of a more recent comparison of algorithms for fastq/bam compression, than this thread?
http://seqanswers.com/forums/showthread.php?t=6349
Best
http://seqanswers.com/forums/showthread.php?t=6349
Best
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--lossy-quality-score-spec all
Exception in thread "main" java.lang.RuntimeException: Uknown read or base category: a at net.sf.cram.lossy.QualityScorePreservation.parseSinglePolicy(QualityScorePreservation.java:138)
The introduction of single-cell sequencing has advanced the ability to study cell-to-cell heterogeneity. Its use has improved our understanding of somatic mutations1, cell lineages2, cellular diversity and regulation3, and development in multicellular organisms4. Single-cell sequencing encompasses hundreds of techniques with different approaches to studying the genomes, transcriptomes, epigenomes, and other omics of individual cells. The analysis of single-cell sequencing data i
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