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  • GenoMax
    replied
    If you are going to use Illumina data then "HiSeq Analysis Software" is a "start to end" solution for a couple of workflows (enrichment/WGS for Human data).

    Documentation, product files, FAQs, and other support resources for the HiSeq Analysis Software v0.9


    There is no graphical interface so you will need to work on the command line.

    Leave a comment:


  • dpryan
    replied
    Originally posted by man4ish View Post
    Hi,

    Is there any open source pipeline for whole genome data analsyis? I need to start fro scratch and move to end solution.

    Regards
    You'll probably want to look at Galaxy.

    Leave a comment:


  • man4ish
    replied
    OPen source pipeline for whole genome analysis of ABI reads

    Hi,

    Is there any open source pipeline for whole genome data analsyis? I need to start fro scratch and move to end solution.

    Regards

    Leave a comment:


  • man4ish
    replied
    OPen source pipeline for whole genome analysis of ABI reads

    Hi,

    Is there any open source pipeline for whole genome data analsyis? I need to start fro scratch and move to end solution.

    Regards

    Leave a comment:


  • bluefin
    started a topic MiSeq and HiSeq sequencing sale

    MiSeq and HiSeq sequencing sale

    Hi everyone, Happy new year!

    We are providing sequencing at a discounted cost. We will beat any core facility price by at least 10%.

    Please contact me at [email protected]

    Thank you

Latest Articles

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  • SEQadmin2
    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
    by SEQadmin2




    NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification, detection...
    Today, 06:46 AM
  • SEQadmin2
    Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
    by SEQadmin2



    Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

    Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
    ...
    10-14-2026, 09:55 AM

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