If you want to know which sequences (transcripts/unigenes/protein) belong to which biological function/gene ontology term with Blast2GO you can use the "Combined Graph Function" and then export the graph as .txt file (from the side-panel). This gives you a spreadsheet with a list of all sequence IDs for each GO terms (one GO per row) for all GO levels and categories. This means direct and indirect functional annotations for MF, CC and BP.
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...
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