NGS assignment (a university course)

[Strangelove]

HI all, i wasn't able to find a proper place to post this - so.. here it goes

I have an assignment that requires a complete detailed description of how to establish a new model organism by doing so i have to design a Next Generation Sequencing strategy for the whole chromosomal genome assembly and expression pattern of the given organism. i have to describe the theory of choice related to sequencing technology, sequencing profile/libraries, assembly method and annotation of genomes and transcriptomes.

it´s a three page assignment, any recommendation regarding choice of strategy and explanatory literature would be greatly appreciated.. well any help at all is appreciated

[SNPsaurus]

Has the course given you any information about this? It seems like a hard topic even as the culmination of an intensive course in the topic.

[mastal]

Find a paper in somewhere like Nature where they report the genome sequence of a model organism, go through the methods in detail and try to understand how and why they used the methods they did.

[Strangelove]

i am still looking for any explanatory literature, if anyone has anything that they would recommend please post the name of the article or other source
- thanks