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  • Hagen
    Junior Member
    • Aug 2012
    • 7

    R installating packages through ssh

    Dear all,

    the following is not really a *seq-question, but if someone had an answer, this would be most appreciated.

    I need to install R on a Mac, to which I only have access by ssh.

    So I did the following:
    sudo curl http://cran.r-project.org/bin/macosx...nowleopard.pkg > R-3.2.1-snowleopard.pkg
    sudo installer -pkg R-3.2.1-snowleopard.pkg -target myDisk

    (myDisk is a placeholder)

    Basic R functions work. E.g. this
    > x=c(1:100)
    > summary(x)
    Min. 1st Qu. Median Mean 3rd Qu. Max.
    1.00 25.75 50.50 50.50 75.25 100.00


    But now I want to install add-on packages. So I try
    > install.packages("hash")
    --- Please select a CRAN mirror for use in this session ---

    upon which I get the error message

    "2016-04-17 13:00:02.355 X11[16550:8804654] Failed to connect (primary_text_field_cell) outlet from (AppDelegate) to (NSTextFieldCell): missing setter or instance variable" when R dies.

    I assume it tries to use X11 and can't ...

    Can anyone tell me how to circumvent this ? E.g. can I force it to give me the list of CRAN mirrors within the terminal ?

    Any help would be very much appreciated!
  • Richard Finney
    Senior Member
    • Feb 2009
    • 701

    #2
    My question is similar to a question previously posted but never really answered here: Disable GUI, graphics devices in R I do not like the R tcltk popups for CRAN mirror selection. They also pop...


    tl/dr:
    options(menu.graphics=FALSE)

    Comment

    • Hagen
      Junior Member
      • Aug 2012
      • 7

      #3
      Thank you! That worked!
      H

      Comment

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