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How to check for Library swap between similar species

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  • How to check for Library swap between similar species

    We have some libraries which we multiplexed for plant and on a
    separate experiment for soil metagenome. We have a doubt that during
    library preparation one or more of the libraries were swapped or even
    a chance that two different index were put on the same library. Is
    there a way to find which libraries were doubly indexed or swapped ?

    Thanks!
    -Abhi

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