Hi from St. Louis
Recently took over a project looking to leverage RNA-Seq to find differentially expressed genes and associated alleles using a mouse model. Using the forums to try and get a handle on tools like EdgeR and DESeq as alternatives to Partek GS. I'm pretty new to Bioinformatics and have only light R experience, so any resource suggestions will be greatly appreciated.
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Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.
We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing...