Hi everyone, I am new to high throughput analyses and trying to be as correct as I can, so I come here for advices!
regards
regards
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Hello
Welcome Vincent.
I am also new, from today on. I just received the sequences for RNASeq of 13 samples as fastq data. For now I was just able to check the quality of the sequences. Now, I would like to delete one overrepresented sequence in one sample, and maybe trimm the end of the sequences. Then I will try to assemble the novo the transcriptome before read countings... I work with a plant species which genome/transcriptome has not been sequenced yet. However I have some contigs that have been assembled from previous work. How could I uptade this contigs with my new sequences?
To introduce myself quickly: I have a second year PhD student, assessing the bioavailability of metal to aquatic plants and algae and trying to link it with gene expression...
I hope to have nice discussions.
Rebecca
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