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  • kspitze
    Junior Member
    • Sep 2013
    • 2

    #1

    Hello

    I am new to bioinformatics. I'm working on a large scale (5000) whole genome sequencing project on Daphnia. I am slowly learning about the various tools that I will need, and am constantly coming up with questions for which I can't find answers. I hope this will be a good place to help find answers. In time, I hope to be able to answer quuestions for others. Thanks in advance to everyone!

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    Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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  • SEQadmin2
    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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    NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
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