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  • SamCurt
    Member
    • May 2010
    • 40

    Hello from Iowa City

    Hi,

    I am a PhD student in the University of Iowa, majoring in Genetics.

    I work a small but very vertically-integrated rat genomics lab, and the part of the project I'd be following includes, among other things, the union of genomic, transcriptomic and metabomic (Sorry for all the omic-dropping here) to study the genomic risks of metabolic syndrome.

    The majority of my NGS need is RNA-seq, which is currently planned to be dealt with ISU's Solexa, but I'll look at possibilities to use the local SOLiD instead.

    My work currently ranges from animal care to Bioperl scripting, but personally I enjoy the more downstream of it much, especially when I don't have much of an abstract thinking to deal with the upstream matters.

Latest Articles

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  • SEQadmin2
    Nine Things a Sample Prep Scientist Thinks About Before Sequencing
    by SEQadmin2


    I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.


    Here are nine questions we think about, in roughly the order they matter, before...
    Yesterday, 07:11 AM
  • SEQadmin2
    From Collection to Sequencing: Why Sample Preparation and Preservation Define Sequencing Data
    by SEQadmin2


    Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.


    The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
    ...
    06-02-2026, 10:05 AM
  • SEQadmin2
    Single-Cell Sequencing at an Inflection Point: Early Impacts of New Platforms and Emerging Trends
    by SEQadmin2


    With the launch of new single-cell sequencing platforms in 2026, the field stands at an exciting inflection point. This article surveys the most impactful advances in the field and discusses how they’re reshaping research in cancer, immunology, and beyond.


    Introduction

    Single-cell sequencing technologies have undergone remarkable advances over the past decade, transitioning from low-throughput experimental approaches to highly scalable platforms capable of...
    05-22-2026, 06:42 AM

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