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  • Marianna Goldrick
    Junior Member
    • Jul 2012
    • 2

    porcine 28S rRNA sequence?

    Does anyone know the Accn # for pig/porcine/sus scrofa complete 28S rRNA sequence? We can only find partial sequences in the NCBI database. Thanks!
  • cliffbeall
    Senior Member
    • Jan 2010
    • 144

    #2
    One idea might be going to the pig genome page, clicking the "BLAST genome" link at upper right and blasting with human 28S? Sometimes rRNAs don't get annotated for some reason.

    Download a genome data package including genome, transcript and protein sequence, annotation and a data report
    Last edited by cliffbeall; 03-26-2015, 10:01 AM. Reason: removed "well"

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    • Marianna Goldrick
      Junior Member
      • Jul 2012
      • 2

      #3
      porcine 28S rRNA Accn #

      Thanks that was very useful. Found Accn# for an alignment covering 87% of human 28S, which is about the best we can do I guess.

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