Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • fpepin
    replied
    Welcome Valeria,

    as for your question, I'll give you the same answer I got when I asked my first question on this thread: go to the bioinformatics forum and ask there.

    That's where people will read it and answer it.

    Leave a comment:


  • Trudy
    started a topic Alignment PE reads with different length by TopHat

    Alignment PE reads with different length by TopHat

    Hello!
    I want to know if TopHat 1.2.0 can work with paired-end reads of different lenght without problems.
    Can I modify the -r/--mate-inner-dist for correct output?

    Example: I have sample with insert size of 200bp, the first read of 75bp and the second read of 50bp (for quality decrease).
    Can I modify -r option as 200-(75-50)? is correct?

    Are there other TopHat options that I must to consider?

    Thanks in advance

    Valeria

Latest Articles

Collapse

  • seqadmin
    Multiomics Techniques Advancing Disease Research
    by seqadmin


    New and advanced multiomics tools and technologies have opened new avenues of research and markedly enhanced various disciplines such as disease research and precision medicine1. The practice of merging diverse data from various ‘omes increasingly provides a more holistic understanding of biological systems. As Maddison Masaeli, Co-Founder and CEO at Deepcell, aptly noted, “You can't explain biology in its complex form with one modality.”

    A major leap in the field has
    ...
    02-08-2024, 06:33 AM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Yesterday, 08:52 AM
0 responses
21 views
0 likes
Last Post seqadmin  
Started by seqadmin, 02-20-2024, 08:57 AM
0 responses
13 views
0 likes
Last Post seqadmin  
Started by seqadmin, 02-14-2024, 09:19 AM
0 responses
49 views
0 likes
Last Post seqadmin  
Started by seqadmin, 02-12-2024, 03:37 PM
0 responses
436 views
0 likes
Last Post seqadmin  
Working...
X