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  • afurman
    Junior Member
    • Mar 2011
    • 2

    #1

    Veteran software engineer, scaling up on bioinformatics

    Greetings, all.

    I've been working on next-gen sequence analysis for the past year or so and am still learning the ropes.

    Currently prototyping a gatk-based analysis pipeline to handle massive amounts of data from 454, Illumina, and Ion Torrent.

    I'm based in San Francisco.

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  • kinpict.com
    Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
    by kinpict.com
    The part about this topic feels surprisingly grounded, and the details on the page is the bit that made me slow down. I’d keep <a href="https://kinpict.com/">ai family photo generator</a> bookmarked for later.
    Today, 06:37 PM
  • SEQadmin2
    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
    by SEQadmin2





    NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
    10-30-2026, 06:46 AM

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