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Related Articles NARWHAL, a primary analysis pipeline for NGS data.
Bioinformatics. 2012 Jan 15;28(2):284-5
Authors: Brouwer RW, van den Hout MC, Grosveld FG, van Ijcken WF
Abstract
The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open-source aligners and automated quality assessment. The entire pipeline can be run using only one simple sample-sheet for diverse sequencing applications. NARWHAL creates a sample-oriented data structure and outperforms existing tools in speed. AVAILABILITY: https://trac.nbic.nl/narwhal/.
PMID: 22072383 [PubMed - indexed for MEDLINE]
More...
Related Articles NARWHAL, a primary analysis pipeline for NGS data.
Bioinformatics. 2012 Jan 15;28(2):284-5
Authors: Brouwer RW, van den Hout MC, Grosveld FG, van Ijcken WF
Abstract
The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open-source aligners and automated quality assessment. The entire pipeline can be run using only one simple sample-sheet for diverse sequencing applications. NARWHAL creates a sample-oriented data structure and outperforms existing tools in speed. AVAILABILITY: https://trac.nbic.nl/narwhal/.
PMID: 22072383 [PubMed - indexed for MEDLINE]
More...