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Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool.
BMC Res Notes. 2011 May 26;4(1):149
Authors: Mariette J, Noirot C, Klopp C
ABSTRACT: PyroCleaner is a software module intended to clean 454 pyrosequencing reads in order to ease the assembly process. This program is a free software and is distributed under the terms of the GNU General Public License as published by the Free Software Foundation. It implements several filters using criteria such as read duplication, length, complexity, base-pair quality and number of undetermined bases. It also permits to clean flowgram files (.sff) of paired-end sequences generating on one hand validated paired-ends file and the other hand single read file.
PMID: 21615897 [PubMed - as supplied by publisher]
More...
Assessment of replicate bias in 454 pyrosequencing and a multi-purpose read-filtering tool.
BMC Res Notes. 2011 May 26;4(1):149
Authors: Mariette J, Noirot C, Klopp C
ABSTRACT: PyroCleaner is a software module intended to clean 454 pyrosequencing reads in order to ease the assembly process. This program is a free software and is distributed under the terms of the GNU General Public License as published by the Free Software Foundation. It implements several filters using criteria such as read duplication, length, complexity, base-pair quality and number of undetermined bases. It also permits to clean flowgram files (.sff) of paired-end sequences generating on one hand validated paired-ends file and the other hand single read file.
PMID: 21615897 [PubMed - as supplied by publisher]
More...